Index of /orozcolab/SNP2Mechanism/PsA_cleaned_analysis/ATAC_seq_analysis/


 

  
   

    [ICO]
    Name
    Last modified
    Size
   

  
  


 [DIR]
 Parent Directory
  
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 [DIR]
 diffbind_result
 11-Jul-2023 09:47 
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 [DIR]
 figures
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 [   ]
 annotated_consensus_peaks.csv
 11-Jul-2023 09:47 
  20M




 [   ]
 ATAC_consensus_peaks.bed
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 2.4M




 [   ]
 ATAC_DESeq2_normalized_counts.csv
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 216M




 [   ]
 ATAC_DESeq2_quantile_normalized_counts.csv
 11-Jul-2023 09:47 
 235M




 [   ]
 ATAC_DESeq2_VST_normalized_counts.csv
 11-Jul-2023 09:47 
 215M




 [   ]
 create_diffbind_dataset.R
 11-Jul-2023 09:47 
 1.8K




 [   ]
 diffbind_DE_active_vs_non_active.ipynb
 11-Jul-2023 09:47 
  28K




 [   ]
 diffbind_DE_CD4vsCD8.ipynb
 11-Jul-2023 09:47 
  20K




 [   ]
 diffbind_object.Rdata
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 237M




 [   ]
 diffbind_size_factors.csv
 11-Jul-2023 09:47 
 3.8K




 [   ]
 quantile_normalize_diffbind_counts.ipynb
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 3.2K




 [   ]
 UMAP_ATAC_seq.ipynb
 17-Jun-2024 22:49 
 206K




 [   ]
 write_diffbind_counts.ipynb
 11-Jul-2023 09:47 
  10K


  
 

 
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